u133a microarray dataset Search Results


geazr  (Gene Logic Inc)
90
Gene Logic Inc geazr
Some additional information regarding to the 5 datasets.
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lc μparaflo human mirna array  (LC Sciences)
90
LC Sciences lc μparaflo human mirna array
Some additional information regarding to the 5 datasets.
Lc μparaflo Human Mirna Array, supplied by LC Sciences, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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phase lock gel heavy  (5 PRIME)
90
5 PRIME phase lock gel heavy
Some additional information regarding to the 5 datasets.
Phase Lock Gel Heavy, supplied by 5 PRIME, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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gse15774 type entrez geo attrs text gse6264 term id 6264  (Thermo Fisher)
93
Thermo Fisher gse15774 type entrez geo attrs text gse6264 term id 6264
Molecular effects of alcohol or drug exposure on the KTN1 mRNA expression in six independent cohorts
Gse15774 Type Entrez Geo Attrs Text Gse6264 Term Id 6264, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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2011 n a pll3 7 rubinson  (Addgene inc)
90
Addgene inc 2011 n a pll3 7 rubinson
Molecular effects of alcohol or drug exposure on the KTN1 mRNA expression in six independent cohorts
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paper n a recombinant dna pwpi didier trono addgene  (Addgene inc)
95
Addgene inc paper n a recombinant dna pwpi didier trono addgene
Molecular effects of alcohol or drug exposure on the KTN1 mRNA expression in six independent cohorts
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normal human neural progenitor cells  (Lonza)
90
Lonza normal human neural progenitor cells
Molecular effects of alcohol or drug exposure on the KTN1 mRNA expression in six independent cohorts
Normal Human Neural Progenitor Cells, supplied by Lonza, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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pmd2 g addgene  (Addgene inc)
98
Addgene inc pmd2 g addgene
Molecular effects of alcohol or drug exposure on the KTN1 mRNA expression in six independent cohorts
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Image Search Results


Some additional information regarding to the 5 datasets.

Journal: PLoS ONE

Article Title: Combining Evidence of Preferential Gene-Tissue Relationships from Multiple Sources

doi: 10.1371/journal.pone.0070568

Figure Lengend Snippet: Some additional information regarding to the 5 datasets.

Article Snippet: Four human microarray datasets were used: GNF1H (Human U133A/GNF1H Gene Atlas) , NCBI GEO GDS3113 , NCBI GEO GSE7307 and GeAZr (licensed from GeneLogic).

Techniques: Microarray

Molecular effects of alcohol or drug exposure on the KTN1 mRNA expression in six independent cohorts

Journal: Addiction biology

Article Title: Significant, replicable and functional associations between KTN1 variants and alcohol and drug co-dependence

doi: 10.1111/adb.12888

Figure Lengend Snippet: Molecular effects of alcohol or drug exposure on the KTN1 mRNA expression in six independent cohorts

Article Snippet: Cohort 1 Cohort 2 Cohort 3 Cohort 4 Cohort 5 Cohort 6 Organism Human Human C57BL/6J mice C57BL/6J mice Human Human Dataset names GEO GEO GEO GEO GEO GEO Accession number {"type":"entrez-geo","attrs":{"text":"GSE56906","term_id":"56906"}} GSE56906 {"type":"entrez-geo","attrs":{"text":"GSE20489","term_id":"20489"}} GSE20489 {"type":"entrez-geo","attrs":{"text":"GSE15774","term_id":"15774"}} GSE15774 {"type":"entrez-geo","attrs":{"text":"GSE15774","term_id":"15774"}} GSE15774 {"type":"entrez-geo","attrs":{"text":"GSE6264","term_id":"6264"}} GSE6264 {"type":"entrez-geo","attrs":{"text":"GSE54839","term_id":"54839"}} GSE54839 References Kim et al., 2016 Kupfer et al. 2013 Korostynski et al. 2013 ; Piechota et al. 2010 Piechota et al. 2010 ; Korostynski et al. 2013 Philibert et al. 2007 Bannon et al. 2014 Experiment methods Affymetrix Human Genome U133A Array Affymetrix Human Genome U133A Array Illumina MouseWG-6 Microarray Illumina MouseWG-6 Microarray ABI 1700 Human Genome Expression Microarray Illumina HT-12 Microarray Measurement of expression Log2(normalized intensity) Log2(normalized intensity) Log2(normalized intensity) Log2(normalized intensity) Log2(normalized intensity) Log2(normalized intensity) Control subjects: Treatment/Phenotype without EtOH without EtOH Saline (1h) Saline (4h) No tobaco abuse No cocaine abuse Tissue types NPCs from differentiated H1 hESC Blood Striatum Striatum Lymphoblast cell Midbrain Sample sizes 2 5 3 3 9 10 Expression levels 12.8±0.01 9.3±1.5 6.53±0.05 6.44±0.01 6.6±0.5 10.6±0.5 Case subjects: Treatment/Phenotype with 20mM EtOH alcohol depletion to <0.02% wt/vol Nicotine (1 mg/kg) (1h after injection) Cocaine (25 mg/kg) (4h after injection) Nicotine dependence Cocaine dependence Tissue types NPCs from differentiated H1 hESC Blood Striatum Striatum Lymphoblast cell Midbrain Sample sizes 2 6 3 3 6 10 Expression levels 12.7±0.02 6.4±0.5 6.29±0.13 6.74±0.16 7.2±0.4 10.8±0.4 p-values for t-test 0.015 0.001 0.040 0.034 0.034 0.088 Open in a separate window GEO, Gene Expression Omnibus database;EtOH, ethanol; NPC, Neural progenitor cells; hESC, human embryonic stem cells.

Techniques: Expressing, Microarray, Injection